Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Adult
Cell type
Whole body
NA
NA

Attributes by original data submitter

Sample

source_name
Adult male fly
tissue
Whole Body
Sex
male
developmental stage
adult
genetic background
atf3 mutant
transfection
--
chip antibody
GFP-Trap_A (gta-20, Chromotek, Germany)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
24570178
Reads aligned (%)
96.0
Duplicates removed (%)
12.2
Number of peaks
1853 (qval < 1E-05)

dm3

Number of total reads
24570178
Reads aligned (%)
96.8
Duplicates removed (%)
10.4
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA