Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Primary B cells
strain
C57BL/6
cell type
B cells from spleen
genotype
Trp53+/+
treatment
mock

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared for Illumina sequencing using a standard protocol consisting in blunting, addition of dA overhangs, ligation of Illumina adapters, selection on gel and PCR with index primers.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
191633602
Reads aligned (%)
91.8
Duplicates removed (%)
16.7
Number of peaks
934 (qval < 1E-05)

mm9

Number of total reads
191633602
Reads aligned (%)
91.6
Duplicates removed (%)
16.6
Number of peaks
1108 (qval < 1E-05)

Base call quality data from DBCLS SRA