GSM5379662: ChIP-seq UTX del-cIDR; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
KDM6A
Cell type
Cell type Class
Blood
Cell type
THP-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous
Attributes by original data submitter
Sample
source_name
THP-1 cells
cell type
Cultured THP-1 cells
antibody
anti-UTX (CST 33510)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
For Chip-seq, genomic DNA were pulled down by antibodies. For RNA-seq, RNA was extracted with Qiagen miRNA-ease RNA extraction kit. HICHIP DNA was collected with Arima HICHIP kit. For ChIP-seq and HICHIP, library preparation using the NEBNext® Ultra™ II DNA Library Prep Kit for Illumina. For RNA-seq, NEBNext® Ultra™ II Directional RNA Library Prep Kit for Illumina was used for library prepapration. Library quality was assessed by Tapstation and Qubit concentration measurement.