Antigen

Antigen Class

TFs and others

Antigen

Egr2

Cell type

Cell type Class

Blood

Cell type

Natural Killer T-Cells

MeSH Description

A specific natural killer T-cell subtype that expresses an invariant T-cell receptor alpha-chain.

Sample

source_name

VA14tg_NKT_EGR2_ChIP

strain

Va14tg

cell type

NKT cells were isolated from Va14tg mice

chip antibody

anti-EGR2 (Krox-20)

chip antibody vendor

Covance

Sequenced DNA Library

library_name

GSM845901: VA14tg_NKT

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

96619154

Reads aligned (%)

80.5

Duplicates removed (%)

68.4

Number of peaks

1016 (qval < 1E-05)

mm9

Number of total reads

96619154

Reads aligned (%)

79.9

Duplicates removed (%)

68.3

Number of peaks

1148 (qval < 1E-05)