Antigen

Antigen Class

TFs and others

Antigen

Egr2

Cell type

Cell type Class

Blood

Cell type

Thymocytes

MeSH Description

HEMATOPOIETIC PROGENITOR CELLS that have migrated to the THYMUS where they differentiate into T-LYMPHOCYTES. Thymocytes are classified into maturational stages based on the expression of CELL SURFACE ANTIGENS.

Sample

source_name

anti-TCRb injected_thymocytes_EGR2_ChIP

strain

Va14tg

cell type

thymocytes from anti-TCRb injected mice

chip antibody

anti-EGR2 (Krox-20)

chip antibody vendor

Covance

Sequenced DNA Library

library_name

GSM845900: Anti-TCRb_inj

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

53695628

Reads aligned (%)

90.8

Duplicates removed (%)

39.5

Number of peaks

802 (qval < 1E-05)

mm9

Number of total reads

53695628

Reads aligned (%)

90.6

Duplicates removed (%)

39.6

Number of peaks

891 (qval < 1E-05)