SRX110510
GSM843544: CNC ChIPSeq 1 and Seq 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
cnc

Cell type

Cell type Class
Adult
Cell type
Adult female
NA
NA

Attributes by original data submitter

Sample

source_name
AdultFemale
developmental stage
AdultFemale
antibody name
CNC
manufacturer
White Lab
catalog
N/A
strain
iso1 (y; bw cn sp)

Sequenced DNA Library

library_name
GSM843544: CNC_ChIPSeq_1 and Seq_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
42428977
Reads aligned (%)
87.8
Duplicates removed (%)
30.0
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
42428977
Reads aligned (%)
87.9
Duplicates removed (%)
28.7
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA