Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
iPSC derived fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
hIPSCs from reprogrammed hiF-T cells (hIPSC-T)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
21594112
Reads aligned (%)
99.0
Duplicates removed (%)
2.8
Number of peaks
782 (qval < 1E-05)

hg19

Number of total reads
21594112
Reads aligned (%)
99.8
Duplicates removed (%)
3.3
Number of peaks
385 (qval < 1E-05)

Base call quality data from DBCLS SRA