SRX109550
GSM840894: Yan ChIPSeq; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
aop

Cell type

Cell type Class
Embryo
Cell type
2h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Stage 11 Drosophila embryos
tissue
embryo
developmental stage
Stage 11
chip antibody
gp anti-Yan

Sequenced DNA Library

library_name
GSM840894: Yan_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
9847608
Reads aligned (%)
28.2
Duplicates removed (%)
15.7
Number of peaks
667 (qval < 1E-05)

dm6

Number of total reads
9847608
Reads aligned (%)
25.6
Duplicates removed (%)
8.5
Number of peaks
722 (qval < 1E-05)

Base call quality data from DBCLS SRA