Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Pluripotent stem cell

Cell type

Embryoid Bodies

MeSH Description

Spontaneous aggregations of human embryonic stem cells that occur in vitro after culturing in a medium that lacks LEUKEMIC INHIBITORY FACTOR. The embryoid bodies can further differentiate into cells that represent different lineages.

Sample

source_name

day 6 embryoid body cels

cell type

day 6 embryoid body cels

chip antibody

none

chip antibody vendor

Epitomics

Sequenced DNA Library

library_name

GSM840467: Input_day 6

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

12163127

Reads aligned (%)

94.4

Duplicates removed (%)

8.7

Number of peaks

615 (qval < 1E-05)

mm9

Number of total reads

12163127

Reads aligned (%)

94.2

Duplicates removed (%)

8.9

Number of peaks

684 (qval < 1E-05)