Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM2B

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
JURKAT
cell line
leukemia cell line JURKAT
chip antibody
anti-KDM2B (Millipore, catalog# 09-864)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Library preapred according to Illumina's instructions

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg19

Number of total reads
50286035
Reads aligned (%)
66.1
Duplicates removed (%)
8.9
Number of peaks
1604 (qval < 1E-05)

hg38

Number of total reads
50286035
Reads aligned (%)
68.1
Duplicates removed (%)
7.1
Number of peaks
1547 (qval < 1E-05)

Base call quality data from DBCLS SRA