Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Lung

Cell type

Lung

MeSH Description

Either of the pair of organs occupying the cavity of the thorax that effect the aeration of the blood.

Sample

source_name

Lung

strain background

C57BL/6N

age

7 weeks

genotype/variation

Rgcc -/-

tissue

Lung

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

Tissues were removed, flash frozen in LN2, and DNA was isolated using Tri-reagent. Illumina TruSeq RNA Sample Prep Kit (Illumina RS-122-2001/2) was used to construct sequencing libraries from double stranded amplicons of Bisulfite treated DNA. Illumina protocol

Sequencing Platform

instrument_model

Illumina MiSeq

mm10

Number of total reads

30202

Reads aligned (%)

100.0

Coverage rate (×)

0.0

Number of hyper MRs

1 (qval < 1E-05)

mm9

Number of total reads

30202

Reads aligned (%)

100.0

Coverage rate (×)

0.0

Number of hyper MRs

1 (qval < 1E-05)