Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Liver

strain background

C57BL/6N

age

7 weeks

genotype/variation

Dstn -/-

tissue

Liver

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

Tissues were removed, flash frozen in LN2, and DNA was isolated using Tri-reagent. Illumina TruSeq RNA Sample Prep Kit (Illumina RS-122-2001/2) was used to construct sequencing libraries from double stranded amplicons of Bisulfite treated DNA. Illumina protocol

Sequencing Platform

instrument_model

Illumina MiSeq

mm10

Number of total reads

203667

Reads aligned (%)

100.0

Coverage rate (×)

0.1

Number of hyper MRs

1 (qval < 1E-05)

mm9

Number of total reads

203667

Reads aligned (%)

100.0

Coverage rate (×)

0.1

Number of hyper MRs

1 (qval < 1E-05)