SRX107297
GSM837996: TAL1 ChIP-seq CCRF-CEM 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TAL1

Cell type

Cell type Class
Blood
Cell type
CCRF-CEM
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
T-ALL cell line
chip antibody
TAL1
antibody catalog number
Santa Cruz SC-12984
antibody manufacturer
Santa Cruz
cell line
CCRF-CEM

Sequenced DNA Library

library_name
GSM837996: TAL1 ChIP-seq CCRF-CEM 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
10778463
Reads aligned (%)
88.3
Duplicates removed (%)
76.9
Number of peaks
562 (qval < 1E-05)

hg19

Number of total reads
10778463
Reads aligned (%)
87.6
Duplicates removed (%)
78.3
Number of peaks
582 (qval < 1E-05)

Base call quality data from DBCLS SRA