SRX107288
GSM837987: HEB ChIP-seq CCRF-CEM 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF12

Cell type

Cell type Class
Blood
Cell type
CCRF-CEM
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
T-ALL cell line
chip antibody
TCF12/HEB
antibody catalog number
Santa Cruz SC-357
antibody manufacturer
Santa Cruz
cell line
CCRF-CEM

Sequenced DNA Library

library_name
GSM837987: HEB ChIP-seq CCRF-CEM 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
15309401
Reads aligned (%)
87.3
Duplicates removed (%)
79.7
Number of peaks
152 (qval < 1E-05)

hg19

Number of total reads
15309401
Reads aligned (%)
86.6
Duplicates removed (%)
81.3
Number of peaks
188 (qval < 1E-05)

Base call quality data from DBCLS SRA