SRX1070613
T-bet ChIP-seq of WT P14 CTLs isolated 8 d.p.i. with LCMV and stimulated with IL-12 replicate 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Spleen
Cell type
Splenocytes
NA
NA

Attributes by original data submitter

Sample

breed
C57BL/6
age
6-8 weeks
sex
female
tissue
Splenocytes
genotype
WT
treatment
IL-12
ID
44

Sequenced DNA Library

library_name
CD8_TBET_WT_IL12.1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
24769690
Reads aligned (%)
60.1
Duplicates removed (%)
15.7
Number of peaks
8747 (qval < 1E-05)

mm9

Number of total reads
24769690
Reads aligned (%)
60.0
Duplicates removed (%)
15.8
Number of peaks
8585 (qval < 1E-05)

Base call quality data from DBCLS SRA