Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Human lymphoblast
cell line
K562
cell type
Human lymphoblast
growth conditions
untreated cells, normal growth conditions
chip antibody
ANTI-FLAG® M2 antibody
chip antibody vendor
Sigma

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
42827661
Reads aligned (%)
97.4
Duplicates removed (%)
2.9
Number of peaks
1194 (qval < 1E-05)

hg19

Number of total reads
42827661
Reads aligned (%)
96.7
Duplicates removed (%)
4.1
Number of peaks
1177 (qval < 1E-05)

Base call quality data from DBCLS SRA