SRX104977
GSM829681: larvae mb h3k27me3; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
whole larvae
tissue
3rd instar larvae
antibody
rb-α-H3K27me3 (Active Motif, 39155)
ChIP
H3K27me3
genotype/variation
Jarid2 mutant

Sequenced DNA Library

library_name
GSM829681: larvae_mb_h3k27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
22856531
Reads aligned (%)
96.5
Duplicates removed (%)
28.0
Number of peaks
10359 (qval < 1E-05)

dm3

Number of total reads
22856531
Reads aligned (%)
96.8
Duplicates removed (%)
26.4
Number of peaks
9194 (qval < 1E-05)

Base call quality data from DBCLS SRA