SRX104976
GSM829680: larvae e0 wce; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
whole larvae
tissue
3rd instar larvae
antibody
none
ChIP
NONE
genotype/variation
Jarid2 mutant

Sequenced DNA Library

library_name
GSM829680: larvae_e0_wce
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
21797397
Reads aligned (%)
95.9
Duplicates removed (%)
40.6
Number of peaks
877 (qval < 1E-05)

dm3

Number of total reads
21797397
Reads aligned (%)
96.8
Duplicates removed (%)
39.0
Number of peaks
1679 (qval < 1E-05)

Base call quality data from DBCLS SRA