SRX104974
GSM829678: larvae e0 suz12; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Su(z)12

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
whole larvae
tissue
3rd instar larvae
antibody
rb-α-Su(z)12 full length (Jürg Müller)
ChIP
Su(z)12
genotype/variation
Jarid2 mutant

Sequenced DNA Library

library_name
GSM829678: larvae_e0_suz12
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
39058925
Reads aligned (%)
94.9
Duplicates removed (%)
28.2
Number of peaks
3989 (qval < 1E-05)

dm3

Number of total reads
39058925
Reads aligned (%)
95.0
Duplicates removed (%)
26.4
Number of peaks
4982 (qval < 1E-05)

Base call quality data from DBCLS SRA