Antigen

Antigen Class

TFs and others

Antigen

ARID2

Cell type

Cell type Class

Liver

Cell type

Hep G2

Primary Tissue

Liver

Tissue Diagnosis

Carcinoma Hepatocellular

Sample

source_name

HepG2_Arid2_ChIP

biomaterial_provider

Cell Line from UNC Tissue Culture Facility

cell line

HepG2

cell type

hepatocellular carcinoma

antibody

Bethyl - A302-230A

antibody lot

A302-230A-1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin Immunoprecipitation on 2e7 cells using antibodies noted in Samples section NEB Next Reagents for Illumina Sequencing

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg19

Number of total reads

19226751

Reads aligned (%)

97.8

Duplicates removed (%)

26.1

Number of peaks

433 (qval < 1E-05)

hg38

Number of total reads

19226751

Reads aligned (%)

98.6

Duplicates removed (%)

24.5

Number of peaks

288 (qval < 1E-05)