SRX103212
GSM822514: H3K27ac ChIPSeq mb; Mus musculus; ChIP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myoblast
cell type
C2C12 myoblast
passages
15-18
strain
C3H
chip antibody
H3K27ac

Sequenced DNA Library

library_name
GSM822514: H3K27ac_ChIPSeq_mb
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
5637669
Reads aligned (%)
65.0
Duplicates removed (%)
14.1
Number of peaks
12951 (qval < 1E-05)

mm9

Number of total reads
5637669
Reads aligned (%)
64.9
Duplicates removed (%)
14.1
Number of peaks
12939 (qval < 1E-05)

Base call quality data from DBCLS SRA