ChIP-Atlas: SRX103011

Antigen

Cell type Class: Blood
Cell type: GM12878
Tissue: blood
Lineage: mesoderm
Description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

source_name: GM12878
biomaterial_provider: GM12878
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus
treatment: None
treatment description: No special treatment or protocol applies
antibody antibodydescription: Rabbit polyclonal. Antibody Target: CTCF
antibody targetdescription: CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.
antibody vendorname: Millipore
antibody vendorid: 07-729
controlid: wgEncodeEH000528
labversion: baseAlignCounts.pl v 1,fseq v 1.84, iff_GM12878,p-value cutoff: 0.05,1% ENCODE array platform validation tests
replicate: 1,3,2
antibody targetdescription: CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.
antibody vendorname: Millipore
antibody vendorid: 07-729
controlid: GM12878/Input
labversion: align_on_cluster_bwa.pl v 1
replicate: 1
replicate description: tier 1