SRX101823
GSM820437: HeLa even

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa
cell line
HeLa
cell type
HeLa S3 cells
lincrna probes
TERC

Sequenced DNA Library

library_name
GSM820437: HeLa_even
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24743830
Reads aligned (%)
89.6
Duplicates removed (%)
19.8
Number of peaks
121011 (qval < 1E-05)

hg19

Number of total reads
24743830
Reads aligned (%)
89.4
Duplicates removed (%)
19.8
Number of peaks
120635 (qval < 1E-05)

Base call quality data from DBCLS SRA