SRX101481
GSM818829: H2B S112 GlcNAc ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2BS112GlcNAc

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa S3 cells
cell type
Human epithelial carcinoma cell line
chip antibody
H2B S112 GlcNAc Mab (clone:MG048A)

Sequenced DNA Library

library_name
GSM818829: H2B S112 GlcNAc_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
50545656
Reads aligned (%)
99.8
Duplicates removed (%)
64.7
Number of peaks
423 (qval < 1E-05)

hg19

Number of total reads
50545656
Reads aligned (%)
99.8
Duplicates removed (%)
65.1
Number of peaks
432 (qval < 1E-05)

Base call quality data from DBCLS SRA