Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Others

Cell type

Fibroblasts

NA

NA

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

SFVAMC Dermatology

BIOMATERIAL_TYPE

Primary Cell Culture

CELL_TYPE

Fibroblast

MARKERS

NA

CULTURE_CONDITIONS

Invitrogen 106 + LSGS

DONOR_ID

skin02

DONOR_AGE

Neonate

DONOR_HEALTH_STATUS

Disease Free

DONOR_SEX

male

DONOR_ETHNICITY

NA

PASSAGE_IF_EXPANDED

4

KARYOTYPE

46, XY

PARITY

NA

sample_term_id

CL_1001608

Sequenced DNA Library

library_name

DS18252

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

38455969

Reads aligned (%)

96.5

Duplicates removed (%)

30.5

Number of peaks

142354 (qval < 1E-05)

hg19

Number of total reads

38455969

Reads aligned (%)

96.0

Duplicates removed (%)

31.5

Number of peaks

142092 (qval < 1E-05)