SRX100314
GSM722388: Smad1 G1Ebmp r1 100914 6

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Smad1

Cell type

Cell type Class
Blood
Cell type
G1E
Tissue
Blood
Lineage
cellLine
Description
Gata1- erythroid progenitor

Attributes by original data submitter

Sample

source_name
Smad1 ChIP-Seq in mouse G1E treated with BMP
cell type
Erthyroid Progenitor (G1E)
chip antibody
Smad1
antibody catalog number
Santa Cruz SC-7965

Sequenced DNA Library

library_name
GSM722388: Smad1_G1Ebmp_r1_100914_6
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
23469806
Reads aligned (%)
83.0
Duplicates removed (%)
16.0
Number of peaks
10757 (qval < 1E-05)

mm9

Number of total reads
23469806
Reads aligned (%)
82.9
Duplicates removed (%)
16.2
Number of peaks
10780 (qval < 1E-05)

Base call quality data from DBCLS SRA