ChIP-Atlas: SRX099895

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Input control
Antigen: Input control

Cell type

Cell type Class: Gonad
Cell type: Round spermatids
NA: NA

Attributes by original data submitter

Sample

source_name: Round spermatids
cell type: Round spermatids
antibody: None

Sequenced DNA Library

library_name: GSM810676: Round-spermatids_input
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads: 43928317
Reads aligned (%): 82.7
Duplicates removed (%): 10.2
Number of peaks: 404 (qval < 1E-05)

mm9

Number of total reads: 43928317
Reads aligned (%): 82.5
Duplicates removed (%): 10.2
Number of peaks: 448 (qval < 1E-05)

Base call quality data from DBCLS SRA