SRX099638
GSM807219: HSF/D.mel PB-seq Rep1 seqA; Drosophila melanogaster; other

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
HSF IP
library strategy
PB-Seq
library selection
immunoprecipitation
library source
naked, sheared genomic Drosophila S2 DNA
antibody
Anti-FLAG M2

Sequenced DNA Library

library_name
GSM807219: HSF/D.mel_PB-seq_Rep1_seqA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
7011050
Reads aligned (%)
83.8
Duplicates removed (%)
92.4
Number of peaks
2642 (qval < 1E-05)

dm3

Number of total reads
7011050
Reads aligned (%)
92.4
Duplicates removed (%)
91.3
Number of peaks
3474 (qval < 1E-05)

Base call quality data from DBCLS SRA