SRX099637
GSM807218: no protein/D.mel PB-seq mock seqB; Drosophila melanogaster; other

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
mock IP (no HSF)
library strategy
PB-Seq
library selection
immunoprecipitation
library source
naked, sheared genomic Drosophila S2 DNA
antibody
Anti-FLAG M2

Sequenced DNA Library

library_name
GSM807218: no_protein/D.mel_PB-seq_mock_seqB
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
11889914
Reads aligned (%)
43.3
Duplicates removed (%)
49.7
Number of peaks
2895 (qval < 1E-05)

dm3

Number of total reads
11889914
Reads aligned (%)
44.1
Duplicates removed (%)
45.4
Number of peaks
3714 (qval < 1E-05)

Base call quality data from DBCLS SRA