Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
Dendritic Cells
MeSH Description
ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Attributes by original data submitter

Sample

source_name
H3K4me1_unstim_DC
cell type
dendritic cells
chip antibody
anti-H3K4me1 (clone CMA302)

Sequenced DNA Library

library_name
GSM801532: H3K4me1_unstim_DC
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
43070080
Reads aligned (%)
89.0
Duplicates removed (%)
17.7
Number of peaks
44974 (qval < 1E-05)

mm9

Number of total reads
43070080
Reads aligned (%)
88.9
Duplicates removed (%)
17.7
Number of peaks
44883 (qval < 1E-05)

Base call quality data from DBCLS SRA