SRX097107
GSM788366: Input ChIP-Seq K562-C/EBPA bmp4

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562-C/EBPA
cell line
K562-C/EBPA
chip antibody
WCE
cell type
K562-C/EBPA

Sequenced DNA Library

library_name
GSM788366: Input ChIP-Seq K562-C/EBPA bmp4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
19697601
Reads aligned (%)
93.8
Duplicates removed (%)
87.0
Number of peaks
7247 (qval < 1E-05)

hg19

Number of total reads
19697601
Reads aligned (%)
93.2
Duplicates removed (%)
88.4
Number of peaks
7259 (qval < 1E-05)

Base call quality data from DBCLS SRA