SRX097101
GSM722429: WCE U937bio r1 100709 4

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
U-937
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma Diffuse Large B Cell

Attributes by original data submitter

Sample

source_name
Input ChIP-Seq U937 BIO
cell line
U937
chip antibody
WCE
antibody catalog number
None WCE

Sequenced DNA Library

library_name
GSM722429: WCE_U937bio_r1_100709_4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22306269
Reads aligned (%)
85.2
Duplicates removed (%)
2.2
Number of peaks
3690 (qval < 1E-05)

hg19

Number of total reads
22306269
Reads aligned (%)
84.7
Duplicates removed (%)
3.0
Number of peaks
3652 (qval < 1E-05)

Base call quality data from DBCLS SRA