SRX097095
GSM722423: CEBPA U937bio r1 100709 5

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CEBPA

Cell type

Cell type Class
Blood
Cell type
U-937
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma Diffuse Large B Cell

Attributes by original data submitter

Sample

source_name
CEBPA ChIP-Seq U937 BIO
cell line
U937
chip antibody
CEBPA
antibody catalog number
Santa Cruz SC-9314

Sequenced DNA Library

library_name
GSM722423: CEBPA_U937bio_r1_100709_5
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
21230457
Reads aligned (%)
79.0
Duplicates removed (%)
20.6
Number of peaks
57734 (qval < 1E-05)

hg19

Number of total reads
21230457
Reads aligned (%)
78.6
Duplicates removed (%)
21.4
Number of peaks
57582 (qval < 1E-05)

Base call quality data from DBCLS SRA