SRX097094
GSM722422: WCE K562bmp4 r1 100608 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Input ChIP-Seq K562 BIO
cell line
K562
chip antibody
WCE
antibody catalog number
None WCE

Sequenced DNA Library

library_name
GSM722422: WCE_K562bmp4_r1_100608_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24030759
Reads aligned (%)
90.5
Duplicates removed (%)
4.3
Number of peaks
10180 (qval < 1E-05)

hg19

Number of total reads
24030759
Reads aligned (%)
90.2
Duplicates removed (%)
4.7
Number of peaks
10209 (qval < 1E-05)

Base call quality data from DBCLS SRA