SRX097071
GSM722397: SMAD1 CD34eryth bmp r1 100922 5

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMAD1

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
SMAD1 ChIP-seq CD34 ertyhroid BMP
cell type
Pro-erythroblasts
chip antibody
SMAD1
antibody catalog number
Santa Cruz SC-7965

Sequenced DNA Library

library_name
GSM722397: SMAD1_CD34eryth_bmp_r1_100922_5
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
20386439
Reads aligned (%)
55.1
Duplicates removed (%)
23.6
Number of peaks
2477 (qval < 1E-05)

hg19

Number of total reads
20386439
Reads aligned (%)
54.6
Duplicates removed (%)
24.8
Number of peaks
2476 (qval < 1E-05)

Base call quality data from DBCLS SRA