SRX096358
GSM790207: EWS502 FLI1 ChIP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Bone
Cell type
EWS502
NA
NA

Attributes by original data submitter

Sample

source_name
Ewing Sarcoma cells
cell line
EWS502
chip antibody
HA

Sequenced DNA Library

library_name
GSM790207: EWS502_FLI1_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
69434626
Reads aligned (%)
86.9
Duplicates removed (%)
16.8
Number of peaks
33368 (qval < 1E-05)

hg19

Number of total reads
69434626
Reads aligned (%)
86.5
Duplicates removed (%)
17.7
Number of peaks
33210 (qval < 1E-05)

Base call quality data from DBCLS SRA