Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SUPT20H

Cell type

Cell type Class
Blood
Cell type
GM12878
Tissue
blood
Lineage
mesoderm
Description
B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Attributes by original data submitter

Sample

source_name
GM12878
cell type
B lymphoblasts
antibody
Rabbit polyclonal
chip antibody
SPT20_3006
vendor
Laszlo Tora

Sequenced DNA Library

library_name
GSM769221: GM_SPT20-chip-seq r1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
21259304
Reads aligned (%)
83.8
Duplicates removed (%)
9.8
Number of peaks
736 (qval < 1E-05)

hg38

Number of total reads
21259304
Reads aligned (%)
84.9
Duplicates removed (%)
9.3
Number of peaks
542 (qval < 1E-05)

Base call quality data from DBCLS SRA