SRX093408
GSM773912: T47D-overexpressing ELF5-ELF5 DNA-24hours-rep1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Breast
Cell type
T-47D
Primary Tissue
Breast
Tissue Diagnosis
Adenocarcinoma Ductal

Attributes by original data submitter

Sample

source_name
T47D cell line
cell line
T47D
treatment
doxycycline
timepoint
24h
enrichment
enriched DNA

Sequenced DNA Library

library_name
GSM773912: T47D-overexpressing ELF5-ELF5 DNA-24hours-rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28195768
Reads aligned (%)
95.7
Duplicates removed (%)
9.2
Number of peaks
789 (qval < 1E-05)

hg19

Number of total reads
28195768
Reads aligned (%)
94.9
Duplicates removed (%)
10.8
Number of peaks
1013 (qval < 1E-05)

Base call quality data from DBCLS SRA