SRX093178
GSM785851: 13 Input DNA Day3 mES s 5 sequence

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse ES
strain
AINV15
cell type
Esrrb_Rescue Clone
time point
Day3
fraction
Input DNA

Sequenced DNA Library

library_name
GSM785851: 13_Input DNA_Day3_mES_s_5_sequence
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
28708014
Reads aligned (%)
93.0
Duplicates removed (%)
26.1
Number of peaks
394 (qval < 1E-05)

mm9

Number of total reads
28708014
Reads aligned (%)
92.8
Duplicates removed (%)
26.2
Number of peaks
436 (qval < 1E-05)

Base call quality data from DBCLS SRA