SRX093177
GSM785850: 12 Input DNA Day1 mES s 4 sequence

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse ES
strain
AINV15
cell type
Esrrb_Rescue Clone
time point
Day1
fraction
Input DNA

Sequenced DNA Library

library_name
GSM785850: 12_Input DNA_Day1_mES_s_4_sequence
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
31220847
Reads aligned (%)
92.8
Duplicates removed (%)
18.4
Number of peaks
364 (qval < 1E-05)

mm9

Number of total reads
31220847
Reads aligned (%)
92.7
Duplicates removed (%)
18.4
Number of peaks
398 (qval < 1E-05)

Base call quality data from DBCLS SRA