SRX093167
GSM785840: 2 Input DNA mES sequence

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse ES
strain
AINV15
cell type
AINV15
fraction
Input DNA

Sequenced DNA Library

library_name
GSM785840: 2_Input DNA_mES_sequence
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13704169
Reads aligned (%)
93.9
Duplicates removed (%)
12.0
Number of peaks
503 (qval < 1E-05)

mm9

Number of total reads
13704169
Reads aligned (%)
93.7
Duplicates removed (%)
12.1
Number of peaks
591 (qval < 1E-05)

Base call quality data from DBCLS SRA