SRX093166
GSM785839: 1 Esrrb ChIP-Seq mES sequence

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Esrrb

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse ES
strain
AINV15
cell type
AINV15
fraction
Chromatin IP
antibody
Esrrb
antibody vendor
R&D systems

Sequenced DNA Library

library_name
GSM785839: 1_Esrrb ChIP-Seq_mES_sequence
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
18075556
Reads aligned (%)
89.6
Duplicates removed (%)
36.9
Number of peaks
14780 (qval < 1E-05)

mm9

Number of total reads
18075556
Reads aligned (%)
89.4
Duplicates removed (%)
37.1
Number of peaks
14749 (qval < 1E-05)

Base call quality data from DBCLS SRA