Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Blood
Cell type
Common myeloid progenitor
NA
NA

Attributes by original data submitter

Sample

source_name
Lin-Sca1-cKit+ cells
fusion protein/snp
Gfi1 36S
cell type
Compromises GMPs (Granulocytic-monocytic-progenitors), CMPs (Common-myeloid-progenitors) and MEPs (Megakaryocytic-erythroid progenitors)
antibody
dimethyl-Histone H3 (Lys4)
antibody vendor
Upstate
background strain
C57Bl/6

Sequenced DNA Library

library_name
GSM786035: WthKI_DiMeK4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
24921425
Reads aligned (%)
69.8
Duplicates removed (%)
7.9
Number of peaks
6208 (qval < 1E-05)

mm9

Number of total reads
24921425
Reads aligned (%)
69.7
Duplicates removed (%)
8.0
Number of peaks
6121 (qval < 1E-05)

Base call quality data from DBCLS SRA