Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Isl1

Cell type

Cell type Class
Pluripotent stem cell
Cell type
mESC derived neural cells
NA
NA

Attributes by original data submitter

Sample

source_name
induced motor neurons (Day4 iNIL differentiation)
cell line
Ainv15 (ATCC SCRC-1029) with Dox-inducible Ngn2.Isl1.Lhx3-V5 construct
cell treatment
+Dox 48hrs
cell stage
induced motor neurons (Day4 iNIL differentiation)
chip antibody
anti-Isl1/2 (gift from Dr. T. Jessell)

Sequenced DNA Library

library_name
GSM782848: ChIP-seq analysis of Isl1/2 in iNIL3 induced motor neurons (Day 4)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
26439726
Reads aligned (%)
93.8
Duplicates removed (%)
79.2
Number of peaks
15836 (qval < 1E-05)

mm9

Number of total reads
26439726
Reads aligned (%)
93.7
Duplicates removed (%)
79.3
Number of peaks
16646 (qval < 1E-05)

Base call quality data from DBCLS SRA