Antigen

Antigen Class

TFs and others

Antigen

NR4A1

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

K562

biomaterial_provider

ATCC

lab

UChicago

lab description

White - University of Chicago

data type

ChipSeq

data type description

ChIP-Seq

cell

K562

cell organism

human

cell description

leukemia, "The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises." - ATCC

cell karyotype

cancer

cell lineage

mesoderm

cell sex

F

antibody

eGFP-NR4A1

antibody antibody description

Goat polyclonal

antibody target description

NR4A1

antibody vendor name

Kevin White

antibody vendor id

(None)

control

Control_eGFP-NR4A1

control description

This data represents a control being compared to experiments using antibody eGFP-NR4A1

control

Control_eGFP-NR4A1

control description

This data represents a control being compared to experiments using antibody eGFP-NR4A1

control id

K562/Input/Control_eGFP-NR4A1

replicate

1

replicate description

tier 1

Sequenced DNA Library

library_name

GSM777637: UChicago_ChipSeq_K562_eGFP-NR4A1_Control_eGFP-NR4A1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

49137116

Reads aligned (%)

98.5

Duplicates removed (%)

3.8

Number of peaks

1660 (qval < 1E-05)

hg19

Number of total reads

49137116

Reads aligned (%)

97.6

Duplicates removed (%)

5.5

Number of peaks

1676 (qval < 1E-05)