Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Blood

Cell type

Lymphoblastoid cell line

Tissue

blood

Lineage

mesoderm

Description

parental cell type to lymphoblastoid cell lines

Sample

source_name

lymphoblastoid cell line

biomaterial_provider

GM18520

cell type

lymphoblastoid cell line

population

YRI

ethnicity

YORUBA

country of origin

NIGERIA

Sequenced DNA Library

library_name

GSM778677: HapMap DNase Seq GM18520

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

37020216

Reads aligned (%)

74.6

Duplicates removed (%)

43.6

Number of peaks

529 (qval < 1E-05)

hg19

Number of total reads

37020216

Reads aligned (%)

73.9

Duplicates removed (%)

44.4

Number of peaks

573 (qval < 1E-05)