SRX090660
ChIP sequencing of HeLa cells with flag-H3.3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
Flag-H3.3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
56049533
Reads aligned (%)
97.3
Duplicates removed (%)
16.7
Number of peaks
32622 (qval < 1E-05)

hg19

Number of total reads
56049533
Reads aligned (%)
97.0
Duplicates removed (%)
17.0
Number of peaks
32582 (qval < 1E-05)

Base call quality data from DBCLS SRA