Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC derived neural cells

NA

NA

Sample

DONOR_HEALTH_STATUS

NA

MOLECULE

genomic DNA

DISEASE

none

MARKERS

>90% beta III tubulin(+) and >60% MAP2(+)

CULTURE_CONDITIONS

Medium: Differentiated from hNP1(trademark) for 2 weeks under defined (feeder & serum free) conditions - AB2+ANS+LIF on Matrigel (i.e., differentiation medium)

PASSAGE_IF_EXPANDED

NA

CELL_TYPE

hN (ES H9 derived Neurons)

DONOR_ETHNICITY

NA

DONOR_SEX

female

BIOMATERIAL_TYPE

Primary Cell Culture

DONOR_ID

113

BIOMATERIAL_PROVIDER

ArunA Biomedical, Athens, GA

DONOR_AGE

embryo

sample_term_id

CL_0000540

Sequenced DNA Library

library_name

Lib:RI:20101012:17--ChIP:MA:20100927:17:hN (ES H9 derived Neurons):H3K36Me3

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

35482161

Reads aligned (%)

97.2

Duplicates removed (%)

1.9

Number of peaks

613 (qval < 1E-05)

hg19

Number of total reads

35482161

Reads aligned (%)

97.0

Duplicates removed (%)

2.2

Number of peaks

683 (qval < 1E-05)