Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
Uninduced Id2-HPC cells, input
genetic background
C57BL/6
genotype
human ID2 transgenic
cell type
multipotent hematopoietic stem cells (HPCs)
hpc induction
uninduced
chip antibody
none

Sequenced DNA Library

library_name
GSM765571: ID2-HPC Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
14573950
Reads aligned (%)
95.8
Duplicates removed (%)
12.1
Number of peaks
538 (qval < 1E-05)

mm9

Number of total reads
14573950
Reads aligned (%)
95.6
Duplicates removed (%)
12.3
Number of peaks
608 (qval < 1E-05)

Base call quality data from DBCLS SRA