SRX084527
GSM738823: RWPE1 FLAG ERG

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
RWPE1_FLAG_ERG
cell line
RWPE-1
antibody
FLAG(Sigma, cat# F1804, lot# 080M6035)
retroviral expression
FLAG-ERG

Sequenced DNA Library

library_name
GSM738823: RWPE1 FLAG ERG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
6035217
Reads aligned (%)
97.0
Duplicates removed (%)
14.5
Number of peaks
208 (qval < 1E-05)

hg19

Number of total reads
6035217
Reads aligned (%)
96.6
Duplicates removed (%)
14.9
Number of peaks
246 (qval < 1E-05)

Base call quality data from DBCLS SRA